ncRNA ID | novel_gar_miR1307 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:42648027-42648104 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715;SRR3180720 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AAUCUCCCUCAAACGCUUCCAGC - 23 |
Stem-loop(if miRNA) |
--AA     CU     G         -AUA    ACACAC     UCUCC  CAAAC CUUCCAGCA    UGCU      U     |||||  ||||| |||||||||    ||||     AGAGG  GUUUG GAAGGUCGU    ACGA      A AGUA     AG     -         CAUG    CCCCUC |
Stem-loop sequence | AAUCUCCCUCAAACGCUUCCAGCAAUAUGCUACACACUACUCCCCAGCAGUACUGCUGGAAGGUUUGGAGGAGAAUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017765734.1 |
|
3.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108465407 (LOC108465407), partial mRNA | uncharacterized LOC108465407(LOC108465407) | coding protein | psRNATarget |