ncRNA ID | novel_gar_miR1304 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:27591765-27591877 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715;SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 90 - AACUCGAUUAACUUGAAUAACUCG - 113 |
Stem-loop(if miRNA) |
--AA        A   U             AUUC AAAACACAACUCGAUUCGAAUU     UUAUUCAA UUA UCGAGUUAUUCGA    G                      C     |||||||| ||| |||||||||||||    |                      G     AAUAAGUU AAU AGCUCAAUAAGCU    G                      A GCUC        C   U             --CA UUGAGCUUAAAAAAAAGCUUAA |
Stem-loop sequence | AAUUAUUCAAAUUAUUCGAGUUAUUCGAAUUCGAAAACACAACUCGAUUCGAAUUCGAAAUUCGAAAAAAAAUUCGAGUUGACUCGAAUAACUCGAUUAACUUGAAUAACUCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017783798.1 |
|
2.0 | PREDICTED: Gossypium arboreum squalene monooxygenase-like (LOC108480717), mRNA | squalene monooxygenase-like(LOC108480717) | coding protein | psRNATarget |