| ncRNA ID | novel_gar_miR1302 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr3:27247393-27247617 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180715 |
| Length | 24 |
| Mature sequence(if miRNA) | 202 - GAGAAGGGAUUGUAUGAAAUUGUG - 225 |
| Stem-loop(if miRNA) |
-- A C C A CC CCA A AU GAA U GAGAAGGGAUUGU UGAAAUUGUGAUUCUACGUUAUUCUUAUUCUUUUUCAAUAGGAGAA GACAAAU A AUUUUU UC AUUUUU GC UUUUAGUU UUUGAA U ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||| || |||||| || |||||||| |||||| CUCUUUCCUAACA ACUUUGAUAUUAAGGUGCAGUAGGGAUAGGGAAAGGUUAUCCUCUU CUGUUUA U UAAAAA AG UAAAAG CG AAAAUUAA GGACUU U UA C A U C AU AAC G -- --- U |
| Stem-loop sequence | GAGAAGGGAUUGUAUGAAAUUGUGAUUCUACGUUAUUCUUAUUCUUUUUCAAUAGGAGAACGACAAAUCAAAUUUUUCCUCCCAAUUUUUAGCAUUUUUAGUUGAAUUUGAAUUUUUUCAGGAAUUAAAAGCGGAAAAUCAAGAUAAAAAAUCUUAUUUGUCAUUCUCCUAUUGGAAAGGGAUAGGGAUGACGUGGAAUUAUAGUUUCACACAAUCCUUUCUCAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017754043.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108455489 (LOC108455489), mRNA | uncharacterized LOC108455489(LOC108455489) | coding protein | psRNATarget | |||||||||
| XM_017766662.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108466330 (LOC108466330), mRNA | uncharacterized LOC108466330(LOC108466330) | coding protein | psRNATarget |