ncRNA ID | novel_gar_miR1298 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:68315576-68315652 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCAUGAUCUUUAGUGGCGUUU - 21 |
Stem-loop(if miRNA) |
--GU                           C    - U     GCCGCUAAAGGUCAUGACUUUUAGCGG GUUU C A     ||||||||||||||||||||||||||| |||| |     CGGUGAUUUCUAGUACUGGAAAUCGCC CGAA G G UUUG                           A    A U |
Stem-loop sequence | GUGCCGCUAAAGGUCAUGACUUUUAGCGGCGUUUCUAGUGAAAGCACCGCUAAAGGUCAUGAUCUUUAGUGGCGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017768165.1 |
|
3.0 | PREDICTED: Gossypium arboreum diphthamide biosynthesis protein 2-like (LOC108467522), mRNA | diphthamide biosynthesis protein 2-like(LOC108467522) | coding protein | psRNATarget |