Search result

BaseInfo

ncRNA ID novel_gar_miR1280
Species Gossypium arboreum
Class miRNA
Genome position Chr10:26777194-26777390 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715
Length 24
Mature sequence(if miRNA) 1 - AUUUUUCGUCUCUUUUAAUUCUUG - 24
Stem-loop(if miRNA) --       GU   U    A           A  UUCUCAAAAUGUAUAAAAAAAAGUUAAAUGUCUGUUAACUUUGUUGACGUGGCAGUCCACAUGU
  AUUUUUC  CUC UUUA UUCUUGAAUUU UA                                                                A
  |||||||  ||| |||| ||||||||||| ||                                                                U
  UAAAAAG  GAG AAAU GAGAAUUUGAA AC                                                                G
AU       UG   U    C           C  AAUAAAUAGUUUAAUGGGGGUUUUACCUACCUUUUAUAUUGCAGAUAAGUGAAACAACUGCAUU
Stem-loop sequence AUUUUUCGUCUCUUUUAAUUCUUGAAUUUAUAUUCUCAAAAUGUAUAAAAAAAAGUUAAAUGUCUGUUAACUUUGUUGACGUGGCAGUCCACAUGUAUGUUACGUCAACAAAGUGAAUAGACGUUAUAUUUUCCAUCCAUUUUGGGGGUAAUUUGAUAAAUAACACAAGUUUAAGAGCUAAAUGAGGUGAAAAAUUA