ncRNA ID | novel_gar_miR1280 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:26777194-26777390 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUUUUCGUCUCUUUUAAUUCUUG - 24 |
Stem-loop(if miRNA) |
--       GU   U    A           A  UUCUCAAAAUGUAUAAAAAAAAGUUAAAUGUCUGUUAACUUUGUUGACGUGGCAGUCCACAUGU   AUUUUUC  CUC UUUA UUCUUGAAUUU UA                                                                A   |||||||  ||| |||| ||||||||||| ||                                                                U   UAAAAAG  GAG AAAU GAGAAUUUGAA AC                                                                G AU       UG   U    C           C  AAUAAAUAGUUUAAUGGGGGUUUUACCUACCUUUUAUAUUGCAGAUAAGUGAAACAACUGCAUU |
Stem-loop sequence | AUUUUUCGUCUCUUUUAAUUCUUGAAUUUAUAUUCUCAAAAUGUAUAAAAAAAAGUUAAAUGUCUGUUAACUUUGUUGACGUGGCAGUCCACAUGUAUGUUACGUCAACAAAGUGAAUAGACGUUAUAUUUUCCAUCCAUUUUGGGGGUAAUUUGAUAAAUAACACAAGUUUAAGAGCUAAAUGAGGUGAAAAAUUA |