| ncRNA ID | novel_gar_miR1279 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr1:66248220-66248421 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180715 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - UUAACGUUUGUUAACUUUGUUGAC - 24 |
| Stem-loop(if miRNA) |
-- CG U CA A C A CAAUA AU ------ AAAAUAUUUAAAAAAUAU UUAA U UGUUAACUUUGUUGA UG CAU CAC UGG UGUCAUGUUAGCAAUUAAUUA UUUUUAAAAU UUAG U |||| | ||||||||||||||| || ||| ||| ||| ||||||||||||||||||||| |||||||||| |||| AAUU A AUAAUUGAAAUGAUU AC GUA GUG ACC ACAGUACAAUUGUUAAUUAAU AAAAAUUUUA AAUU U UU AU U AC C U C ----C -- UUUUAC UUUUAAUUUUUAAAAUUU |
| Stem-loop sequence | UUAACGUUUGUUAACUUUGUUGACAUGACAUCCACAUGGCAAUAUGUCAUGUUAGCAAUUAAUUAAUUUUUUAAAAUUUAGAAAAUAUUUAAAAAAUAUUUUUUAAAAUUUUUAAUUUUUUAACAUUUUAUUUUAAAAAUAAUUAAUUGUUAACAUGACACCCACGUGUAUGCCACAUUAGUAAAGUUAAUAUAUAUUAAUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017789559.1 |
|
2.5 | PREDICTED: Gossypium arboreum phosphoinositide phospholipase C 6 (LOC108485709), mRNA | phosphoinositide phospholipase C 6(LOC108485709) | coding protein | psRNATarget |