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BaseInfo

ncRNA ID novel_gar_miR1272
Species Gossypium arboreum
Class miRNA
Genome position Chr1:9677198-9677417 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715
Length 23
Mature sequence(if miRNA) 198 - AUUUUGUGCUGGCCUGUCAAUGG - 220
Stem-loop(if miRNA) --      -  C              A        --U   --UAAAAA      UUU      UUUUU            C        A          A        UAAAA
  AUUUUG UG UGGCCUGUCAAUGG CGGCACCA   UAU        UAAAAA   AAAUUU     GUGCUGGCUUGU AAUGGCCG CACCAAAAUA GAGUUUUU     A
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  UAAAAC AC ACCGGACAGUUACC GUCGUGGU   AUG        AUUUUU   UUUAAA     CACGACCGGACA UUACCGGC GUGGUUUUAU CUCAAAAA     A
UU      C  A              G        UUU   CUCAAAAA      -UU      ----C            A        C          G        UUAAA
Stem-loop sequence AUUUUGUGCUGGCCUGUCAAUGGACGGCACCAUUAUUAAAAAUAAAAAUUUAAAUUUUUUUUGUGCUGGCUUGUCAAUGGCCGACACCAAAAUAAGAGUUUUUUAAAAAAAAAUUAAAAACUCGUAUUUUGGUGCCGGCCAUUAACAGGCCAGCACCAAAUUUUUUUUUUAAAAAACUCGUAUUUUGGUGCUGGCCAUUGACAGGCCAACACCAAAAUUU