ncRNA ID | novel_gar_miR1268 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr13:63237249-63237302 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715;SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 31 - AUCGGUCGGUUAACAGAAUUAAUU - 54 |
Stem-loop(if miRNA) |
--       G      A      AUUC   UUAAUUC GUUAAC GACUGA    G   ||||||| |||||| ||||||   AAUUAAG CAAUUG CUGGCU    G UU       A      G      AAUC |
Stem-loop sequence | UUAAUUCGGUUAACAGACUGAAUUCGGCUAAUCGGUCGGUUAACAGAAUUAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017783840.1 |
|
2.5 | PREDICTED: Gossypium arboreum E3 ubiquitin-protein ligase RMA1H1-like (LOC108480747), mRNA | E3 ubiquitin-protein ligase RMA1H1-like(LOC108480747) | coding protein | psRNATarget |