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BaseInfo

ncRNA ID novel_gar_miR1268
Species Gossypium arboreum
Class miRNA
Genome position Chr13:63237249-63237302 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715;SRR3180720
Length 24
Mature sequence(if miRNA) 31 - AUCGGUCGGUUAACAGAAUUAAUU - 54
Stem-loop(if miRNA) --       G      A      AUUC
  UUAAUUC GUUAAC GACUGA    G
  ||||||| |||||| ||||||
  AAUUAAG CAAUUG CUGGCU    G
UU       A      G      AAUC
Stem-loop sequence UUAAUUCGGUUAACAGACUGAAUUCGGCUAAUCGGUCGGUUAACAGAAUUAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017783840.1
ncRNA:24   UUAAUUAAGACAAUUGGCUGGCUA   1
  =||**||||*||||||||||||*|
targets:876   GAUCUAUUCGGUUAACCGACCGUU   899

2.5 PREDICTED: Gossypium arboreum E3 ubiquitin-protein ligase RMA1H1-like (LOC108480747), mRNA E3 ubiquitin-protein ligase RMA1H1-like(LOC108480747) coding protein psRNATarget