ncRNA ID | novel_gar_miR1264 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr13:5496658-5496733 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 21 |
Mature sequence(if miRNA) | 56 - UCAUGAUCUUUAGUGGCGUUU - 76 |
Stem-loop(if miRNA) |
--                            G     GU   GCGUCGCUAAAGGUCAUGAUCUUUAGCG CGUUU  G   |||||||||||||||||||||||||||| |||||  G   UGCGGUGAUUUCUAGUACUGGAAAUCGC GCGAA  A UU                            -     AA |
Stem-loop sequence | GCGUCGCUAAAGGUCAUGAUCUUUAGCGGCGUUUGUGGAAAAAGCGCGCUAAAGGUCAUGAUCUUUAGUGGCGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017768165.1 |
|
3.0 | PREDICTED: Gossypium arboreum diphthamide biosynthesis protein 2-like (LOC108467522), mRNA | diphthamide biosynthesis protein 2-like(LOC108467522) | coding protein | psRNATarget |