ncRNA ID | novel_gar_miR1256 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr13:44292488-44292601 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715;SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAGUACUUGAACUUUCAAAAUGCA - 24 |
Stem-loop(if miRNA) |
-- A                                      --  UUUCAAAAAAAG   G GUACUUGAACUUUCAAAAUGCAUCAAAAAGACCCUCAA  GC            C   | ||||||||||||||||||||||||||||||||||||||  ||   C CAUGAACUUGAAAGUUUUACGUAGUUUUUCUGGGAGUU  UC            A AA C                                      AA  AAACCCGAAUUA |
Stem-loop sequence | GAGUACUUGAACUUUCAAAAUGCAUCAAAAAGACCCUCAAGCUUUCAAAAAAAGCAAUUAAGCCCAAACUAAUUGAGGGUCUUUUUGAUGCAUUUUGAAAGUUCAAGUACCCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017749804.1 |
|
2.5 | PREDICTED: Gossypium arboreum LOB domain-containing protein 4-like (LOC108452068), mRNA | LOB domain-containing protein 4-like(LOC108452068) | coding protein | psRNATarget |