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BaseInfo

ncRNA ID	novel_gar_miR1246
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr1:67097186-67097289 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180715
Length	24
Mature sequence(if miRNA)	1 - AUUUAAUUUGGACUGCCAUAUAGG - 24
Stem-loop(if miRNA)	--UAC              -      ------UAAAUG  AACUUGGAUGUCUAG      AUGGCAGUUCAAAU AGAUUU            CC               U      |||||||||||||| ||||||            ||               U      UACCGUCAGGUUUA UUUAAA            UA               G GGAUA              A      UAAAUUAAUUUU  GAUCAAAAUAGGGUC
Stem-loop sequence	UACAUGGCAGUUCAAAUAGAUUUUAAAUGCCAACUUGGAUGUCUAGUUGCUGGGAUAAAACUAGAUUUUUAAUUAAAUAAAUUUAAUUUGGACUGCCAUAUAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017753110.1	ncRNA:24   GGAUAUACCGUCAGGUUUAAUUUA   1   |=|||=||||||||=||||||||| targets:1674   CUUAUGUGGCAGUCUAAAUUAAAU   1697 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X7, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753109.1	ncRNA:24   GGAUAUACCGUCAGGUUUAAUUUA   1   |=|||=||||||||=||||||||| targets:1677   CUUAUGUGGCAGUCUAAAUUAAAU   1700 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X6, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753105.1	ncRNA:24   GGAUAUACCGUCAGGUUUAAUUUA   1   |=|||=||||||||=||||||||| targets:1707   CUUAUGUGGCAGUCUAAAUUAAAU   1730 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X3, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753107.1	ncRNA:24   GGAUAUACCGUCAGGUUUAAUUUA   1   |=|||=||||||||=||||||||| targets:1764   CUUAUGUGGCAGUCUAAAUUAAAU   1787 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X4, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753108.1	ncRNA:24   GGAUAUACCGUCAGGUUUAAUUUA   1   |=|||=||||||||=||||||||| targets:1782   CUUAUGUGGCAGUCUAAAUUAAAU   1805 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X5, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753103.1	ncRNA:24   GGAUAUACCGUCAGGUUUAAUUUA   1   |=|||=||||||||=||||||||| targets:1812   CUUAUGUGGCAGUCUAAAUUAAAU   1835 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X1, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753104.1	ncRNA:24   GGAUAUACCGUCAGGUUUAAUUUA   1   |=|||=||||||||=||||||||| targets:1867   CUUAUGUGGCAGUCUAAAUUAAAU   1890 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X2, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget