ncRNA ID | novel_gar_miR1244 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr13:126695362-126695451 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715;SRR3180721 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUCUUUAACUUGCCUUUGUCA - 21 |
Stem-loop(if miRNA) |
--  U                   A    AUCAAAUUACCCAAAC   AC AAGGCAAGUUAAAGAAAAA AUUU                A   || ||||||||||||||||||| ||||   UG UUCCGUUCAAUUUCUUUUU UAAA                A AC  U                   C    CAAAAAAAUUUACUUA |
Stem-loop sequence | ACUAAGGCAAGUUAAAGAAAAAAAUUUAUCAAAUUACCCAAACAAAUUCAUUUAAAAAAACAAAUCUUUUUCUUUAACUUGCCUUUGUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017779187.1 |
|
1.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108476830 (LOC108476830), mRNA | uncharacterized LOC108476830(LOC108476830) | coding protein | psRNATarget | |||||||||
XM_017782758.1 |
|
1.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108479909 (LOC108479909), mRNA | uncharacterized LOC108479909(LOC108479909) | coding protein | psRNATarget |