| ncRNA ID | novel_gar_miR1233 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr1:73296798-73296864 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180715 |
| Length | 21 |
| Mature sequence(if miRNA) | 47 - CAAAAAGUGCGAAGAACCAGG - 67 |
| Stem-loop(if miRNA) |
-- A C CUG CA AAAGUGCGAAGAA CAGGCCUUAAU U || ||||||||||||| ||||||||||| A GU UUUCACGCUUCUU GUCCGGAAUUA C GU G A AAU |
| Stem-loop sequence | CAAAAAGUGCGAAGAACCAGGCCUUAAUCUGUACUAAAUUAAGGCCUGAUUCUUCGCACUUUGUGUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017756349.1 |
|
2.5 | PREDICTED: Gossypium arboreum serine/threonine protein phosphatase 2A regulatory subunit B''alpha-like (LOC108457330), transcript variant X3, mRNA | serine/threonine protein phosphatase 2A regulatory subunit B''alpha-like(LOC108457330) | coding protein | psRNATarget | |||||||||
| XM_017756338.1 |
|
2.5 | PREDICTED: Gossypium arboreum serine/threonine protein phosphatase 2A regulatory subunit B''alpha-like (LOC108457330), transcript variant X1, mRNA | serine/threonine protein phosphatase 2A regulatory subunit B''alpha-like(LOC108457330) | coding protein | psRNATarget |