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BaseInfo

ncRNA ID novel_gar_miR1230
Species Gossypium arboreum
Class miRNA
Genome position Chr1:75972230-75972307 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715;SRR3180720;SRR3180721
Length 21
Mature sequence(if miRNA) 1 - UCAUGAUCUUUAGUGGCGUUU - 21
Stem-loop(if miRNA) -                                   GU
 AGCGCCGCUAAAGGUCAUGAUCUUUAGCGGCGUUU  G
 |||||||||||||||||||||||||||||||||||  G
 UUGCGGUGAUUUCUAGUACUGGAAAUCGCCGCGAA  A
U                                   AA
Stem-loop sequence AGCGCCGCUAAAGGUCAUGAUCUUUAGCGGCGUUUGUGGAAAAAGCGCCGCUAAAGGUCAUGAUCUUUAGUGGCGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017768165.1
ncRNA:21   UUUGCGGUGAUUUCUAGUACU   1
  ||=||||=||||||||||||*
targets:1500   AAGCGCCGCUAAAGAUCAUGU   1520

3.0 PREDICTED: Gossypium arboreum diphthamide biosynthesis protein 2-like (LOC108467522), mRNA diphthamide biosynthesis protein 2-like(LOC108467522) coding protein psRNATarget