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BaseInfo

ncRNA ID novel_gar_miR1225
Species Gossypium arboreum
Class miRNA
Genome position Chr1:95732277-95732350 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715;SRR3180719;SRR3180719;SRR3180720;SRR3180721;SRR1029587
Length 22
Mature sequence(if miRNA) 53 - ACUCUCCCUCAAGGGCUUCCUG - 74
Stem-loop(if miRNA) --        U     GC    U   A    UCCGAA
  ACUCUCCC CAAGG  UUCC GCA UGCC      U
  |||||||| |||||  |||| ||| ||||      A
  UGAGAGGG GUUUC  AAGG CGU ACGG      C
AG        -     UA    U   A    UCCCGU
Stem-loop sequence ACUCUCCCUCAAGGGCUUCCUGCAAUGCCUCCGAAUACUGCCCUGGCAAUGCUGGAAAUCUUUGGGGAGAGUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017754868.1
ncRNA:22   GUCCUUCGGGAACUCCCUCUCA   1
  =*|||||||=|||||||||||*
targets:771   UUGGAAGCCUUUGAGGGAGAGA   792

2.5 PREDICTED: Gossypium arboreum DELLA protein RGL1-like (LOC108456273), mRNA DELLA protein RGL1-like(LOC108456273) coding protein psRNATarget