ncRNA ID | novel_gar_miR1225 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:95732277-95732350 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715;SRR3180719;SRR3180719;SRR3180720;SRR3180721;SRR1029587 |
Length | 22 |
Mature sequence(if miRNA) | 53 - ACUCUCCCUCAAGGGCUUCCUG - 74 |
Stem-loop(if miRNA) |
--        U     GC    U   A    UCCGAA   ACUCUCCC CAAGG  UUCC GCA UGCC      U   |||||||| |||||  |||| ||| ||||      A   UGAGAGGG GUUUC  AAGG CGU ACGG      C AG        -     UA    U   A    UCCCGU |
Stem-loop sequence | ACUCUCCCUCAAGGGCUUCCUGCAAUGCCUCCGAAUACUGCCCUGGCAAUGCUGGAAAUCUUUGGGGAGAGUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017754868.1 |
|
2.5 | PREDICTED: Gossypium arboreum DELLA protein RGL1-like (LOC108456273), mRNA | DELLA protein RGL1-like(LOC108456273) | coding protein | psRNATarget |