| ncRNA ID | novel_gar_miR1219 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr12:48616604-48616782 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180715;SRR3180720 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AAUUCAGGUCCGAUUGUUAACACU - 24 |
| Stem-loop(if miRNA) |
--AA C -AAAAUUC ----------------UAA CAAUACAACGCCAAUUUUUUAGUUACAU UUCAGGUCCGAUUGUUAACA UGU UUUUGUUAAAUU GUU U |||||||||||||||||||| ||| |||||||||||| ||| AAGUUUAGGUUAACAAUUGU ACA AAAACAAUUUAA UUA G UUUG U AAAAAAAA CUAACUACACUUUAAAACU AAAAAUUUUUUUUAGUGAACCAUCGUUC |
| Stem-loop sequence | AAUUCAGGUCCGAUUGUUAACACUGUAAAAUUCUUUUGUUAAAUUUAAGUUCAAUACAACGCCAAUUUUUUAGUUACAUUGCUUGCUACCAAGUGAUUUUUUUUAAAAAAUUUCAAAAUUUCACAUCAAUCAAUUUAACAAAAAAAAAAAAACAUUGUUAACAAUUGGAUUUGAAGUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017749527.1 |
|
2.5 | PREDICTED: Gossypium arboreum dirigent protein 22-like (LOC108451837), mRNA | dirigent protein 22-like(LOC108451837) | coding protein | psRNATarget |