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BaseInfo

ncRNA ID	novel_gar_miR1211
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr12:5527499-5527585 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180715;SRR3180720
Length	23
Mature sequence(if miRNA)	65 - AAGGCAAAGGAAGAAAAGAGUGA - 87
Stem-loop(if miRNA)	--      AA               AAG   UG --        AAA   AAGGCA  GGAAGAAAAGAGUGA   AUU  G  GUUUUGAG   A   ||||||  |||||||||||||||   |||  |  ||||||||   UUCCGU  CCUUUUUUUCUCACU   UGG  C  CAAAACUU   U CG      --               ---   GU AG        AAC
Stem-loop sequence	AAGGCAAAGGAAGAAAAGAGUGAAAGAUUUGGGUUUUGAGAAAAUCAAUUCAAAACGACUGGGUUCACUCUUUUUUUCCUGCCUUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017787876.1	ncRNA:23   AGUGAGAAAAGAAGGAAACGGAA   1   ||-=|||||||||=||||||||| targets:128   UC-UUCUUUUCUUUCUUUGCCUU   149 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum uncharacterized LOC108484180 (LOC108484180), transcript variant X3, mRNA	uncharacterized LOC108484180(LOC108484180)	coding protein	psRNATarget
XM_017787875.1	ncRNA:23   AGUGAGAAAAGAAGGAAACGGAA   1   ||-=|||||||||=||||||||| targets:127   UC-UUCUUUUCUUUCUUUGCCUU   148 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum uncharacterized LOC108484180 (LOC108484180), transcript variant X1, mRNA	uncharacterized LOC108484180(LOC108484180)	coding protein	psRNATarget
XM_017759091.1	ncRNA:23   AGUGAGAAAAGAAGGAAACGGAA   1   ||-=||||||||||||||*|||| targets:333   UC-UUCUUUUCUUCCUUUUCCUU   354 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum cation/H(+) antiporter 20-like (LOC108459690), mRNA	cation/H(+) antiporter 20-like(LOC108459690)	coding protein	psRNATarget