ncRNA ID | novel_gar_miR1210 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:9217244-9217359 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 23 |
Mature sequence(if miRNA) | 94 - UUUGACAAUUGUUCUCAUGUGAA - 116 |
Stem-loop(if miRNA) |
--                    -GAA        UUUU             CAUGA    U   UUUGACAAUUGUUCUCAUGU    GCCUAAAU    UUUUUUGUCCAAC     UUUU U   ||||||||||||||||||||    ||||||||    |||||||||||||     ||||   GAAUUGUUAAUAAGGGUGUA    CGGAUUUA    AAAAAACAGGUUG     AAAA U UU                    AUUA        ---U             --AAA    U |
Stem-loop sequence | UUUGACAAUUGUUCUCAUGUGAAGCCUAAAUUUUUUUUUUUGUCCAACCAUGAUUUUUUUUAAAAAAAGUUGGACAAAAAAUAUUUAGGCAUUAAUGUGGGAAUAAUUGUUAAGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017759793.1 |
|
1.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108460338 (LOC108460338), mRNA | uncharacterized LOC108460338(LOC108460338) | coding protein | psRNATarget |