| ncRNA ID | novel_gar_miR1209 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr12:48717372-48717557 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180715;SRR3180720 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - UCGAUAGUUUGAGGAUGUAAC - 21 |
| Stem-loop(if miRNA) |
--C A C A GC CC -CU C G G ACAUUCUCAAACUAUCGAU UUAUAU AAU AG CCUU GUUA AAAUCGUUAAUUUAAC GUUAAAUGA AU UGAGAUUUUAUGU ||||||||||||||||||| |||||| ||| || |||| |||| |||||||||||||||| ||||||||| || ||||||||||||G UGUAGGAGUUUGAUAGCUA AAUAUA UUA UU GGAA UAAU UUUGGUAAUUAAAUUG UAAUUUACU UG AUUCUAGGAUAUA CAA C U G UA UA AAC U G A |
| Stem-loop sequence | CACAUUCUCAAACUAUCGAUAUUAUAUCAAUAAGGCCCUUCCGUUACUAAAUCGUUAAUUUAACCGUUAAAUGAGAUGUGAGAUUUUAUGUGAUAUAGGAUCUUAAGUGUCAUUUAAUUGUUAAAUUAAUGGUUUCAAUAAUAUAAGGAUUUGAUUUAUAUAACAUCGAUAGUUUGAGGAUGUAAC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017751158.1 |
|
2.5 | PREDICTED: Gossypium arboreum enoyl-CoA hydratase 2, peroxisomal (LOC108453194), mRNA | enoyl-CoA hydratase 2, peroxisomal(LOC108453194) | coding protein | psRNATarget |