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BaseInfo

ncRNA ID	novel_gar_miR1204
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr12:91043044-91043196 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180715;SRR3180720
Length	23
Mature sequence(if miRNA)	131 - UGAUUGUAGUGAUUUAUUGUACU - 153
Stem-loop(if miRNA)	--   UU U     -U          AUU        AUA   GGAU    UGG          CUU    UUUAAGU    U   UGA  G AGUGA  UUAUUGUACU   AAAUUACG   GAG    AUUC   CUAGGAAAGA   GGUA       GAUC U   |||  | |||||  ||||||||||   ||||||||   |||    ||||   ||||||||||   ||||       |||| C   ACU  C UCAUU  AAUAACAUGA   UUUAGUGU   UUC    UAAG   GGUCCUUUCU   CCAU       CUAG G AC   UU -     UU          CUU        -GG   AAGU    ---          -CU    -------    U
Stem-loop sequence	UGAUUGUAGUGAUUUAUUGUACUAUUAAAUUACGAUAGAGGGAUAUUCUGGCUAGGAAAGACUUGGUAUUUAAGUGAUCUUCGUGAUCUACCUCUCUUUCCUGGGAAUUGAACUUGGUGUGAUUUUUCAGUACAAUAAUUUUACUCUUUCACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017791503.1	ncRNA:23   UCAUGUUAUUUAGUGAUGUUAGU   1   ||*||||||||||||||||||=| targets:3954   AGCACAAUAAAUCACUACAAUUA   3976 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum receptor-like protein 12 (LOC108487216), transcript variant X7, mRNA	receptor-like protein 12(LOC108487216)	coding protein	psRNATarget
XM_017791501.1	ncRNA:23   UCAUGUUAUUUAGUGAUGUUAGU   1   ||*||||||||||||||||||=| targets:4301   AGCACAAUAAAUCACUACAAUUA   4323 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum receptor-like protein 12 (LOC108487216), transcript variant X5, mRNA	receptor-like protein 12(LOC108487216)	coding protein	psRNATarget
XM_017791502.1	ncRNA:23   UCAUGUUAUUUAGUGAUGUUAGU   1   ||*||||||||||||||||||=| targets:4352   AGCACAAUAAAUCACUACAAUUA   4374 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum receptor-like protein 12 (LOC108487216), transcript variant X6, mRNA	receptor-like protein 12(LOC108487216)	coding protein	psRNATarget
XM_017791500.1	ncRNA:23   UCAUGUUAUUUAGUGAUGUUAGU   1   ||*||||||||||||||||||=| targets:4496   AGCACAAUAAAUCACUACAAUUA   4518 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum receptor-like protein 12 (LOC108487216), transcript variant X4, mRNA	receptor-like protein 12(LOC108487216)	coding protein	psRNATarget
XM_017791499.1	ncRNA:23   UCAUGUUAUUUAGUGAUGUUAGU   1   ||*||||||||||||||||||=| targets:4906   AGCACAAUAAAUCACUACAAUUA   4928 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum receptor-like protein 12 (LOC108487216), transcript variant X3, mRNA	receptor-like protein 12(LOC108487216)	coding protein	psRNATarget
XM_017791498.1	ncRNA:23   UCAUGUUAUUUAGUGAUGUUAGU   1   ||*||||||||||||||||||=| targets:5073   AGCACAAUAAAUCACUACAAUUA   5095 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum receptor-like protein 12 (LOC108487216), transcript variant X2, mRNA	receptor-like protein 12(LOC108487216)	coding protein	psRNATarget
XM_017791497.1	ncRNA:23   UCAUGUUAUUUAGUGAUGUUAGU   1   ||*||||||||||||||||||=| targets:5163   AGCACAAUAAAUCACUACAAUUA   5185 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum receptor-like protein 12 (LOC108487216), transcript variant X1, mRNA	receptor-like protein 12(LOC108487216)	coding protein	psRNATarget