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BaseInfo

ncRNA ID	novel_gar_miR1199
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr12:132571886-132571934 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180715;SRR3180720
Length	24
Mature sequence(if miRNA)	26 - AAUGCUCCGUAACCCUGUUCUGGU - 49
Stem-loop(if miRNA)	--        G    - C     UG   AAUGCUCC UAAC C UGUUC  G   |||||||| |||| | |||||  U   UUGUGGGG AUUG G AUAGG  G CA        -    A C     UU
Stem-loop sequence	AAUGCUCCGUAACCCUGUUCUGGUGUUGGAUACGAGUUAGGGGUGUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017750397.1	ncRNA:24   UGGUCUUGUCCCAAUGCCUCGUAA   1   =|==|||=|||||||||||||||| targets:685   GCUGGAAUAGGGUUACGGAGCAUU   708 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108452575 (LOC108452575), transcript variant X4, mRNA	uncharacterized LOC108452575(LOC108452575)	coding protein	psRNATarget
XM_017750381.1	ncRNA:24   UGGUCUUGUCCCAAUGCCUCGUAA   1   =|==|||=|||||||||||||||| targets:867   GCUGGAAUAGGGUUACGGAGCAUU   890 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108452575 (LOC108452575), transcript variant X2, mRNA	uncharacterized LOC108452575(LOC108452575)	coding protein	psRNATarget
XM_017750389.1	ncRNA:24   UGGUCUUGUCCCAAUGCCUCGUAA   1   =|==|||=|||||||||||||||| targets:869   GCUGGAAUAGGGUUACGGAGCAUU   892 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108452575 (LOC108452575), transcript variant X3, mRNA	uncharacterized LOC108452575(LOC108452575)	coding protein	psRNATarget
XM_017750373.1	ncRNA:24   UGGUCUUGUCCCAAUGCCUCGUAA   1   =|==|||=|||||||||||||||| targets:883   GCUGGAAUAGGGUUACGGAGCAUU   906 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108452575 (LOC108452575), transcript variant X1, mRNA	uncharacterized LOC108452575(LOC108452575)	coding protein	psRNATarget