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BaseInfo

ncRNA ID novel_gar_miR1196
Species Gossypium arboreum
Class miRNA
Genome position Chr1:138692337-138692430 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715
Length 21
Mature sequence(if miRNA) 1 - AUUUUGGUGUGUAGAAAUUGA - 21
Stem-loop(if miRNA) --         CU U     --    UUA UUGAGUUCAAAGAUUAUGA
  AAUUUCUAC  C CUAAA  CAUG   U                   G
  |||||||||  | |||||  ||||   |
  UUAAAGAUG  G GGUUU  UAUA   U                   A
AG         -U U     UA    -GU UUAUAGUUAUAGAUUUGAA
Stem-loop sequence AAUUUCUACCUCUCUAAACAUGUUAUUUGAGUUCAAAGAUUAUGAGAAAGUUUAGAUAUUGAUAUUUUGAUAUAUUUUGGUGUGUAGAAAUUGA