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BaseInfo

ncRNA ID novel_gar_miR1195
Species Gossypium arboreum
Class miRNA
Genome position Chr10:113215823-113216038 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715
Length 24
Mature sequence(if miRNA) 1 - AGGCACACGGACUGUUCACACGGG - 24
Stem-loop(if miRNA) --      UCU   -        UA        CAU  -U     G      G -CCC   A   U    --U  -A   AAA      A  CU       A  --       C
  CGUGUG   CAG CCGUGUGU  CACACGGU   GU  GCACG CCGUGU U    CUG UGU GAAA   GG  AUG   GUUAGC UG  CCACACG CC  UCACACA G
  ||||||   ||| ||||||||  ||||||||   ||  ||||| |||||| |    ||| ||| ||||   ||  |||   |||||| ||  ||||||| ||  |||||||
  GCACAC   GUC GGCACACG  GUGUGCCG   CA  UGUGC GGCACA A    GGC ACA CUUU   CC  UAU   UAAUUG AC  GGUGUGC GG  AGUGUGU G
GG      -UU   A        GA        -AU  UC     G      G AUAU   -   -    UGU  CG   GUA      A  AU       C  UU       G
Stem-loop sequence CGUGUGUCUCAGCCGUGUGUUACACACGGUCAUGUUGCACGGCCGUGUGUCCCCUGAUGUUGAAAUGGAAUGAAAGUUAGCAUGCUCCACACGACCUCACACACGGGUGUGUGAUUGGCCGUGUGGUACAAGUUAAUAUGUAUGCCCUGUUUUCACACGGUAUAAGACACGGGCGUGUCUACUAGCCGUGUGAGGCACACGGACUGUUCACACGGG