ncRNA ID | novel_gar_miR1195 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:113215823-113216038 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGCACACGGACUGUUCACACGGG - 24 |
Stem-loop(if miRNA) |
--      UCU   -        UA        CAU  -U     G      G -CCC   A   U    --U  -A   AAA      A  CU       A  --       C   CGUGUG   CAG CCGUGUGU  CACACGGU   GU  GCACG CCGUGU U    CUG UGU GAAA   GG  AUG   GUUAGC UG  CCACACG CC  UCACACA G   ||||||   ||| ||||||||  ||||||||   ||  ||||| |||||| |    ||| ||| ||||   ||  |||   |||||| ||  ||||||| ||  |||||||   GCACAC   GUC GGCACACG  GUGUGCCG   CA  UGUGC GGCACA A    GGC ACA CUUU   CC  UAU   UAAUUG AC  GGUGUGC GG  AGUGUGU G GG      -UU   A        GA        -AU  UC     G      G AUAU   -   -    UGU  CG   GUA      A  AU       C  UU       G |
Stem-loop sequence | CGUGUGUCUCAGCCGUGUGUUACACACGGUCAUGUUGCACGGCCGUGUGUCCCCUGAUGUUGAAAUGGAAUGAAAGUUAGCAUGCUCCACACGACCUCACACACGGGUGUGUGAUUGGCCGUGUGGUACAAGUUAAUAUGUAUGCCCUGUUUUCACACGGUAUAAGACACGGGCGUGUCUACUAGCCGUGUGAGGCACACGGACUGUUCACACGGG |