ncRNA ID | novel_gar_miR1191 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:11677343-11677430 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715;SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAAAAUCGUAAUGUUGAGGGUGU - 24 |
Stem-loop(if miRNA) |
--        -G       -GA    GUC  UCAAAAAAUAAAAA   AAAAAAUC  UAAUGUU   GGGU   AA              G   ||||||||  |||||||   ||||   ||   UUUUUUGG  GUUACAA   CCCA   CC              G UU        GA       ACC    AAA  AAAGCACGGGAAUU |
Stem-loop sequence | AAAAAAUCGUAAUGUUGAGGGUGUCAAUCAAAAAAUAAAAAGGUUAAGGGCACGAAACCAAAACCCCCAAACAUUGAGGGUUUUUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017762977.1 |
|
1.5 | PREDICTED: Gossypium arboreum 7-deoxyloganetin glucosyltransferase-like (LOC108463037), mRNA | 7-deoxyloganetin glucosyltransferase-like(LOC108463037) | coding protein | psRNATarget |