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BaseInfo

ncRNA ID novel_gar_miR1191
Species Gossypium arboreum
Class miRNA
Genome position Chr12:11677343-11677430 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715;SRR3180720
Length 24
Mature sequence(if miRNA) 1 - AAAAAAUCGUAAUGUUGAGGGUGU - 24
Stem-loop(if miRNA) --        -G       -GA    GUC  UCAAAAAAUAAAAA
  AAAAAAUC  UAAUGUU   GGGU   AA              G
  ||||||||  |||||||   ||||   ||
  UUUUUUGG  GUUACAA   CCCA   CC              G
UU        GA       ACC    AAA  AAAGCACGGGAAUU
Stem-loop sequence AAAAAAUCGUAAUGUUGAGGGUGUCAAUCAAAAAAUAAAAAGGUUAAGGGCACGAAACCAAAACCCCCAAACAUUGAGGGUUUUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017762977.1
ncRNA:24   UGUGGGAGUUGUAAUGCUAAAAAA   1
  |=||*|||||||||||||||*|||
targets:1556   AUACACUCAACAUUACGAUUAUUU   1579

1.5 PREDICTED: Gossypium arboreum 7-deoxyloganetin glucosyltransferase-like (LOC108463037), mRNA 7-deoxyloganetin glucosyltransferase-like(LOC108463037) coding protein psRNATarget