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BaseInfo

ncRNA ID novel_gar_miR1186
Species Gossypium arboreum
Class miRNA
Genome position Chr1:12989872-12989933 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715;SRR3180720
Length 24
Mature sequence(if miRNA) 1 - UUAAAAAGGGAUAAGAAUAACGUG - 24
Stem-loop(if miRNA) --           U      A CG      C
  UUAAAAAGGGA AAGAAU A  UGAAAU A
  ||||||||||| |||||| |  ||||||
  AAUUUUUUUUU UUCUUA U  AUUUUA C
AU           U      C AU      A
Stem-loop sequence UUAAAAAGGGAUAAGAAUAACGUGAAAUCACAAUUUUAUAUCAUUCUUUUUUUUUUUUAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017755229.1
ncRNA:24   GUGCAAUAAGAAUAGGGAAAAAUU   1
  =*=***|||||||||||||||||*
targets:12   UCUCAAAUUCUUAUCCCUUUUUAU   35

2.0 PREDICTED: Gossypium arboreum ubiquitin-conjugating enzyme E2 32 (LOC108456657), mRNA ubiquitin-conjugating enzyme E2 32(LOC108456657) coding protein psRNATarget