ncRNA ID | novel_gar_miR1186 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:12989872-12989933 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715;SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUAAAAAGGGAUAAGAAUAACGUG - 24 |
Stem-loop(if miRNA) |
--           U      A CG      C   UUAAAAAGGGA AAGAAU A  UGAAAU A   ||||||||||| |||||| |  ||||||   AAUUUUUUUUU UUCUUA U  AUUUUA C AU           U      C AU      A |
Stem-loop sequence | UUAAAAAGGGAUAAGAAUAACGUGAAAUCACAAUUUUAUAUCAUUCUUUUUUUUUUUUAAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017755229.1 |
|
2.0 | PREDICTED: Gossypium arboreum ubiquitin-conjugating enzyme E2 32 (LOC108456657), mRNA | ubiquitin-conjugating enzyme E2 32(LOC108456657) | coding protein | psRNATarget |