ncRNA ID | novel_gar_miR1182 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:115318097-115318170 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715;SRR3180720 |
Length | 21 |
Mature sequence(if miRNA) | 54 - UGACGUGGACAAAAUGCUCCC - 74 |
Stem-loop(if miRNA) |
--                   U         CU   U   GAGCGUUUUGUCCACGUCA CACAAAGCG  UCC U   ||||||||||||||||||| |||||||||  |||   CUCGUAAAACAGGUGCAGU GUGUUUCGC  GGG G CC                   C         AC   A |
Stem-loop sequence | GAGCGUUUUGUCCACGUCAUCACAAAGCGCUUCCUUGAGGGCACGCUUUGUGCUGACGUGGACAAAAUGCUCCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017784438.1 |
|
2.5 | PREDICTED: Gossypium arboreum serine/threonine-protein phosphatase 7 long form homolog (LOC108481281), mRNA | serine/threonine-protein phosphatase 7 long form homolog(LOC108481281) | coding protein | psRNATarget |