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BaseInfo

ncRNA ID novel_gar_miR1182
Species Gossypium arboreum
Class miRNA
Genome position Chr1:115318097-115318170 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715;SRR3180720
Length 21
Mature sequence(if miRNA) 54 - UGACGUGGACAAAAUGCUCCC - 74
Stem-loop(if miRNA) --                   U         CU   U
  GAGCGUUUUGUCCACGUCA CACAAAGCG  UCC U
  ||||||||||||||||||| |||||||||  |||
  CUCGUAAAACAGGUGCAGU GUGUUUCGC  GGG G
CC                   C         AC   A
Stem-loop sequence GAGCGUUUUGUCCACGUCAUCACAAAGCGCUUCCUUGAGGGCACGCUUUGUGCUGACGUGGACAAAAUGCUCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017784438.1
ncRNA:21   CCCUCGUAAAACAGGUGCAGU   1
  ||||||=|||||||||=||||
targets:5   GGGAGCGUUUUGUCCAUGUCA   25

2.5 PREDICTED: Gossypium arboreum serine/threonine-protein phosphatase 7 long form homolog (LOC108481281), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC108481281) coding protein psRNATarget