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BaseInfo

ncRNA ID	novel_gar_miR1180
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr3:4597730-4597795 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029586
Length	24
Mature sequence(if miRNA)	1 - CAAUGGAUUUCGAAUCGAUCGGCU - 24
Stem-loop(if miRNA)	CAUGA    UGGUGGAUUUUGGGAUGGAAAAAC      UCAU                        C      ||||                        G      GGCU                        A ---UC    AGCUAAGCUUUAGGUAACCCACCA
Stem-loop sequence	CAUGAUCAUUGGUGGAUUUUGGGAUGGAAAAACCGAACCACCCAAUGGAUUUCGAAUCGAUCGGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017759354.1	ncRNA:24   UCGG--CUAGCUAAGCUUUAGGUAAC   1   =|==--||||||||||||||=||||| targets:1502   GGUUCGGAUCGAUUCGAAAUUCAUUG   1527 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum putative nuclease HARBI1 (LOC108459960), mRNA	putative nuclease HARBI1(LOC108459960)	coding protein	psRNATarget
XM_017752786.1	ncRNA:24   UCGGCUAG---CUAAGCUUUAGGUAAC   1   =|==-|||---|||||||||||||||| targets:284   GGUU-AUCCAGGAUUCGAAAUCCAUUG   309 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 (LOC108454354), transcript variant X1, mRNA	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1(LOC108454354)	coding protein	psRNATarget