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BaseInfo

ncRNA ID novel_gar_miR1173
Species Gossypium arboreum
Class miRNA
Genome position Chr11:12550609-12550728 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715
Length 24
Mature sequence(if miRNA) 97 - AAACACCGCUAAAGAACAUGACUU - 120
Stem-loop(if miRNA) --AAACA                    UAA          -GGAA             AGUC
       CCGCUAAAGAACAUGACUUU   UGGUGUUUUU     AGGCGUUGCUAAA    A
       ||||||||||||||||||||   ||||||||||     |||||||||||||
       GGCGAUUUCUUGUACUGAGA   AUCACGAGAG     UUUGCGACGAUUU    A
UUUUUAC                    ---          AGGUG             CUUG
Stem-loop sequence AAACACCGCUAAAGAACAUGACUUUUAAUGGUGUUUUUGGAAAGGCGUUGCUAAAAGUCAAGUUCUUUAGCAGCGUUUGUGGAGAGAGCACUAAGAGUCAUGUUCUUUAGCGGCAUUUUU