| ncRNA ID | novel_gar_miR1170 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr11:33642683-33642860 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180715 |
| Length | 24 |
| Mature sequence(if miRNA) | 155 - AUUUCGAUCUUGACAUAAAUGAUG - 178 |
| Stem-loop(if miRNA) |
-- A U G A CC -C UUGAACUUU UG AAUAUGUAAAAAUAACAAAUUGAUAUGUCAUUA AUUUCG UC U AC UAAAUGAUGAU UUAAU UAUUAA UAG AGU C |||||| || | || ||||||||||| ||||| |||||| ||| ||| A UAAAGU AG A UG AUUUGCUAUUG AAUUA AUAAUU GUG AUA G UU C U G - AC AA -----CAAA -- AAAGUUUUAUAUUACGUCGUUUAUAUAAUAGUA |
| Stem-loop sequence | AUUUCGAUCUUGACAUAAAUGAUGAUCCUUAAUCUAUUAAUUGAACUUUUAGUGAGUAAUAUGUAAAAAUAACAAAUUGAUAUGUCAUUACAGAUGAUAAUAUAUUUGCUGCAUUAUAUUUUGAAAAUAGUGAAACUUAAUAAAAUUAACAGUUAUCGUUUAGUGAUGACUGAAAUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017750262.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108452469 (LOC108452469), mRNA | uncharacterized LOC108452469(LOC108452469) | coding protein | psRNATarget |