ncRNA ID | novel_gar_miR1169 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:34966383-34966477 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCCGAGCUUUGUCAUGUUGAAUC - 24 |
Stem-loop(if miRNA) |
--UUA          UU C   --U    -A   CCU      U  UAG      GACAUGAUAG  C UGG   UUAC  GUU   AUUUUA AU   A      ||||||||||  | |||   ||||  |||   |||||| ||      UUGUACUGUU  G GCC   AGUG  CAA   UAAAAU UA   U CUAAG          UC A   UAC    AA   UCU      U  UUA |
Stem-loop sequence | UUAGACAUGAUAGUUCCUGGUUUACAGUUCCUAUUUUAUAUUAGAUAUUAUUUAAAAUUCUAACAAGUGACAUCCGAGCUUUGUCAUGUUGAAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017757571.1 |
|
3.0 | PREDICTED: Gossypium arboreum uncharacterized oxidoreductase At1g06690, chloroplastic (LOC108458251), mRNA | uncharacterized oxidoreductase At1g06690, chloroplastic(LOC108458251) | coding protein | psRNATarget |