ncRNA ID | novel_gar_miR1168 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:35295062-35295145 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 21 |
Mature sequence(if miRNA) | 64 - AUAAAAUACUGAUGUGACAUA - 84 |
Stem-loop(if miRNA) |
--                   UAAU       ---        UU   AUAAAAUACUGAUGUGACA    UGAUCAA   AUAUUAAA  G   |||||||||||||||||||    |||||||   ||||||||  U   UAUUUUAUGAUUGCACUGU    ACUAGUU   UAUGAUUU  G UG                   ----       GAU        UA |
Stem-loop sequence | AUAAAAUACUGAUGUGACAUAAUUGAUCAAAUAUUAAAUUGUGAUUUUAGUAUUAGUUGAUCAUGUCACGUUAGUAUUUUAUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017778083.1 |
|
2.0 | PREDICTED: Gossypium arboreum 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic-like (LOC108476030), mRNA | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic-like(LOC108476030) | coding protein | psRNATarget |