ncRNA ID | novel_gar_miR1166 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:92100747-92100825 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 22 |
Mature sequence(if miRNA) | 58 - UUUCCAAUUCCUCCCAUUCCAC - 79 |
Stem-loop(if miRNA) |
--       -                  GA   UUCUCUG   GGAAUGG AGGAGUUGGAAAGAUUUU  AUU       U   ||||||| ||||||||||||||||||  |||   CCUUACC UCCUUAACCUUUCUAAAA  UAA       A CA       C                  AG   UAAUUUU |
Stem-loop sequence | GGAAUGGAGGAGUUGGAAAGAUUUUGAAUUUUCUCUGUAUUUUAAUAAUGAAAAAUCUUUCCAAUUCCUCCCAUUCCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017749243.1 |
|
0.0 | PREDICTED: Gossypium arboreum zinc finger CCCH domain-containing protein 15-like (LOC108451570), mRNA | zinc finger CCCH domain-containing protein 15-like(LOC108451570) | coding protein | psRNATarget |