ncRNA ID | novel_gar_miR1164 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:61382888-61382969 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CUUAGAUAUUUUGGUAAAAGC - 21 |
Stem-loop(if miRNA) |
--                                      A   UUUUACCAAAAUAUCUAAGGAUUUACCAAAAUUUCUAA G   ||||||||||||||||||||||||||||||||||||||   AAAAUGGUUUUAUAGAUUCCUAAAUGGUUUUAAAGAUU U CG                                      G |
Stem-loop sequence | UUUUACCAAAAUAUCUAAGGAUUUACCAAAAUUUCUAAAGUGUUAGAAAUUUUGGUAAAUCCUUAGAUAUUUUGGUAAAAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017747372.1 |
|
2.5 | PREDICTED: Gossypium arboreum probable GTP-binding protein OBGC2 (LOC108449970), mRNA | probable GTP-binding protein OBGC2(LOC108449970) | coding protein | psRNATarget | |||||||||
XM_017747858.1 |
|
2.5 | PREDICTED: Gossypium arboreum gibberellin 2-beta-dioxygenase 8 (LOC108450299), mRNA | gibberellin 2-beta-dioxygenase 8(LOC108450299) | coding protein | psRNATarget |