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BaseInfo

ncRNA ID novel_gar_miR1163
Species Gossypium arboreum
Class miRNA
Genome position Chr10:92100563-92100639 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715;SRR3180719;SRR3180720;SRR3180721
Length 22
Mature sequence(if miRNA) 56 - UUGCCGAUUCCACCCAUGCCUA - 77
Stem-loop(if miRNA) --   -  U   U  U            UAUAUCUUGUC
  GGC UG GGU GA UCGGCAAGAAAA           U
  ||| || ||| || ||||||||||||           U
  CCG AC CCA CU AGCCGUUCUUUU           U
AU   U  -   C  U            UAUUUUUAUUU
Stem-loop sequence GGCUGUGGUUGAUUCGGCAAGAAAAUAUAUCUUGUCUUUUUUAUUUUUAUUUUUCUUGCCGAUUCCACCCAUGCCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017749243.1
ncRNA:22   AUCCGUACCCACCUUAGCCGUU   1
  ||||||||||||||||||||||
targets:2647   UAGGCAUGGGUGGAAUCGGCAA   2668

0.0 PREDICTED: Gossypium arboreum zinc finger CCCH domain-containing protein 15-like (LOC108451570), mRNA zinc finger CCCH domain-containing protein 15-like(LOC108451570) coding protein psRNATarget