ncRNA ID | novel_gar_miR1163 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:92100563-92100639 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715;SRR3180719;SRR3180720;SRR3180721 |
Length | 22 |
Mature sequence(if miRNA) | 56 - UUGCCGAUUCCACCCAUGCCUA - 77 |
Stem-loop(if miRNA) |
--   -  U   U  U            UAUAUCUUGUC   GGC UG GGU GA UCGGCAAGAAAA           U   ||| || ||| || ||||||||||||           U   CCG AC CCA CU AGCCGUUCUUUU           U AU   U  -   C  U            UAUUUUUAUUU |
Stem-loop sequence | GGCUGUGGUUGAUUCGGCAAGAAAAUAUAUCUUGUCUUUUUUAUUUUUAUUUUUCUUGCCGAUUCCACCCAUGCCUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017749243.1 |
|
0.0 | PREDICTED: Gossypium arboreum zinc finger CCCH domain-containing protein 15-like (LOC108451570), mRNA | zinc finger CCCH domain-containing protein 15-like(LOC108451570) | coding protein | psRNATarget |