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BaseInfo

ncRNA ID novel_gar_miR1162
Species Gossypium arboreum
Class miRNA
Genome position Chr11:68462234-68462368 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715
Length 22
Mature sequence(if miRNA) 114 - CUUCGAUGUUUGAAUGUCUCAA - 135
Stem-loop(if miRNA) ---CU    -U      A      A       G   UC      C AGAU  GGGGCAGGGCAAUAACUA
     UCGA  GUUUGA UGUCUC AGACAAG GGU  UUGUCU G    UU                  U
     ||||  |||||| |||||| ||||||| |||  |||||| |    ||                  U
     AGUU  CGGAUU ACAGAG UCUGUUC CCG  AACAGA C    CA                  U
AUGUC    UU      -      C       A   GA      A ---A  AUUUUCAUGUAACUUCGA
Stem-loop sequence CUUCGAUGUUUGAAUGUCUCAAGACAAGGGGUUCUUGUCUCGAGAUUUGGGGCAGGGCAAUAACUAUUUAGCUUCAAUGUACUUUUAACACAAGACAAAGGCCACUUGUCUCGAGACAUUAGGCUUUUGACUGUA