ncRNA ID | novel_gar_miR1162 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:68462234-68462368 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 22 |
Mature sequence(if miRNA) | 114 - CUUCGAUGUUUGAAUGUCUCAA - 135 |
Stem-loop(if miRNA) |
---CU    -U      A      A       G   UC      C AGAU  GGGGCAGGGCAAUAACUA      UCGA  GUUUGA UGUCUC AGACAAG GGU  UUGUCU G    UU                  U      ||||  |||||| |||||| ||||||| |||  |||||| |    ||                  U      AGUU  CGGAUU ACAGAG UCUGUUC CCG  AACAGA C    CA                  U AUGUC    UU      -      C       A   GA      A ---A  AUUUUCAUGUAACUUCGA |
Stem-loop sequence | CUUCGAUGUUUGAAUGUCUCAAGACAAGGGGUUCUUGUCUCGAGAUUUGGGGCAGGGCAAUAACUAUUUAGCUUCAAUGUACUUUUAACACAAGACAAAGGCCACUUGUCUCGAGACAUUAGGCUUUUGACUGUA |