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BaseInfo

ncRNA ID novel_gar_miR1161
Species Gossypium arboreum
Class miRNA
Genome position Chr3:9109381-9109484 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - GUAACAGUCUGAUUUUGGGCCUAG - 24
Stem-loop(if miRNA) --         U     G      --     UCAUCACAUACCAAUC  UGAGCCCAAAA
  AGGCCCAAA UCAGG UGUUAC  ACAUG                UU           A
  ||||||||| ||||| ||||||  |||||                ||
  UCCGGGUUU AGUCU ACAAUG  UGUGC                CU           U
GA         U     G      UC     --------------UA  AUUUUAAGAUA
Stem-loop sequence AGGCCCAAAUUCAGGGUGUUACACAUGUCAUCACAUACCAAUCUUUGAGCCCAAAAAUAUAGAAUUUUAUCAUCGUGUCUGUAACAGUCUGAUUUUGGGCCUAG