ncRNA ID | novel_gar_miR1152 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:12295581-12295803 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586;SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 200 - CCAUGUCUCAGGCUGUGUGGGCAU - 223 |
Stem-loop(if miRNA) |
--CCA          -      -G    UA   G        AC   -      ----   ACU    UCCUU   CA    ACUC           ------------- C          C     G      UGUCUCAGGC UGUGUG  GCAU  GAU UGAGGCAC  GGC UGUGUC    CCA   UGUG     ACC  UGUA    UCUGACUUGUG             C ACACGGCCUG CACAC C      |||||||||| ||||||  ||||  ||| ||||||||  ||| ||||||    |||   ||||     |||  ||||    |||||||||||             | |||||||||| |||||      ACAGAGUCCG ACACAC  UGUG  CUG AUUUUGUG  CCG ACACAG    GGU   ACAC     UGG  ACGU    GGAUUGAACAC             G UGUGCUGGAU GUGUG C CGCAC          U      AA    --   G        -C   C      AACC   ---    ---UU   --    ----           UUUUAAUUUAACU U          C     C |
Stem-loop sequence | CCAUGUCUCAGGCUGUGUGGGCAUUAGAUGUGAGGCACACGGCUGUGUCCCAACUUGUGUCCUUACCCAUGUAACUCUCUGACUUGUGCCACACGGCCUGCCACACGCCCGUGUGCUAGGUCGUGUUGUCAAUUUAAUUUUCACAAGUUAGGUGCAGGUUUCACAUGGCCAAGACACACGCCCGUGUUUUAGGUCGUGUAACACACAUGCCUGAGACACACGC |