Search result

BaseInfo

ncRNA ID novel_gar_miR1152
Species Gossypium arboreum
Class miRNA
Genome position Chr3:12295581-12295803 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586;SRR1029587
Length 24
Mature sequence(if miRNA) 200 - CCAUGUCUCAGGCUGUGUGGGCAU - 223
Stem-loop(if miRNA) --CCA          -      -G    UA   G        AC   -      ----   ACU    UCCUU   CA    ACUC           ------------- C          C     G
     UGUCUCAGGC UGUGUG  GCAU  GAU UGAGGCAC  GGC UGUGUC    CCA   UGUG     ACC  UGUA    UCUGACUUGUG             C ACACGGCCUG CACAC C
     |||||||||| ||||||  ||||  ||| ||||||||  ||| ||||||    |||   ||||     |||  ||||    |||||||||||             | |||||||||| |||||
     ACAGAGUCCG ACACAC  UGUG  CUG AUUUUGUG  CCG ACACAG    GGU   ACAC     UGG  ACGU    GGAUUGAACAC             G UGUGCUGGAU GUGUG C
CGCAC          U      AA    --   G        -C   C      AACC   ---    ---UU   --    ----           UUUUAAUUUAACU U          C     C
Stem-loop sequence CCAUGUCUCAGGCUGUGUGGGCAUUAGAUGUGAGGCACACGGCUGUGUCCCAACUUGUGUCCUUACCCAUGUAACUCUCUGACUUGUGCCACACGGCCUGCCACACGCCCGUGUGCUAGGUCGUGUUGUCAAUUUAAUUUUCACAAGUUAGGUGCAGGUUUCACAUGGCCAAGACACACGCCCGUGUUUUAGGUCGUGUAACACACAUGCCUGAGACACACGC