ncRNA ID | novel_gar_miR1151 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:66709258-66709339 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715;SRR3180720 |
Length | 21 |
Mature sequence(if miRNA) | 1 - ACUUUCUAAAUUAUUCCCAUG - 21 |
Stem-loop(if miRNA) |
--         A      C AU      UUUC      CUCA   ACUUUCUAA UUAUUC C  GUGAGU    CCACUU    U   ||||||||| |||||| |  ||||||    ||||||    A   UGAAAGAUU AAUAAG G  CACUCA    GGUGAA    G AU         G      U CC      ---U      UACC |
Stem-loop sequence | ACUUUCUAAAUUAUUCCCAUGUGAGUUUUCCCACUUCUCAUAGCCAUAAGUGGUACUCACCCGUGAAUAAGUUAGAAAGUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017772260.1 |
|
2.5 | PREDICTED: Gossypium arboreum probable LRR receptor-like serine/threonine-protein kinase At3g47570 (LOC108470790), mRNA | probable LRR receptor-like serine/threonine-protein kinase At3g47570(LOC108470790) | coding protein | psRNATarget |