ncRNA ID | novel_gar_miR1149 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:45571087-45571218 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 22 |
Mature sequence(if miRNA) | 111 - GUGACUAAGAUAAGAACGGUUG - 132 |
Stem-loop(if miRNA) |
--        G     -        ---U    AAUU    -   GG    A -    CA   UUAUAAUU   ACCGUUUU GUCUU GUCAUACU    GUGA    GCCA GCU  AUUU C CGCC  CCG        U   |||||||| ||||| ||||||||    ||||    |||| |||  |||| | ||||  |||        U   UGGCAAGA UAGAA CAGUGUGA    UACU    UGGU CGG  UAAA G GCGG  GGU        U GU        A     U        UGAG    ----    G   AG    A A    -C   UGAUACUU |
Stem-loop sequence | ACCGUUUUGGUCUUGUCAUACUUGUGAAAUUGCCAGCUGGAUUUACCGCCCACCGUUAUAAUUUUUUUCAUAGUUGGCGGCGAGAAAAUGAGGCGUGGUUCAUGAGUAGUGUGACUAAGAUAAGAACGGUUG |