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BaseInfo

ncRNA ID novel_gar_miR1149
Species Gossypium arboreum
Class miRNA
Genome position Chr8:45571087-45571218 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715
Length 22
Mature sequence(if miRNA) 111 - GUGACUAAGAUAAGAACGGUUG - 132
Stem-loop(if miRNA) --        G     -        ---U    AAUU    -   GG    A -    CA   UUAUAAUU
  ACCGUUUU GUCUU GUCAUACU    GUGA    GCCA GCU  AUUU C CGCC  CCG        U
  |||||||| ||||| ||||||||    ||||    |||| |||  |||| | ||||  |||        U
  UGGCAAGA UAGAA CAGUGUGA    UACU    UGGU CGG  UAAA G GCGG  GGU        U
GU        A     U        UGAG    ----    G   AG    A A    -C   UGAUACUU
Stem-loop sequence ACCGUUUUGGUCUUGUCAUACUUGUGAAAUUGCCAGCUGGAUUUACCGCCCACCGUUAUAAUUUUUUUCAUAGUUGGCGGCGAGAAAAUGAGGCGUGGUUCAUGAGUAGUGUGACUAAGAUAAGAACGGUUG