ncRNA ID | novel_gar_miR1148 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:1300053-1300128 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715;SRR3180719;SRR3180720;SRR3180721;SRR1029586 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCAUGAUCUUUAGUGGCGUUU - 21 |
Stem-loop(if miRNA) |
--               CCA UC          G   U   GCGCCACUAAAGGUU   A  UUUAGCGGCG UUU U   |||||||||||||||   |  |||||||||| |||   UGCGGUGAUUUCUAG   U  AAAUCGCCGC AAA A UU               UAC GA          G   A |
Stem-loop sequence | GCGCCACUAAAGGUUCCAAUCUUUAGCGGCGGUUUUUAAAAAGCGCCGCUAAAAGUCAUGAUCUUUAGUGGCGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017768165.1 |
|
3.0 | PREDICTED: Gossypium arboreum diphthamide biosynthesis protein 2-like (LOC108467522), mRNA | diphthamide biosynthesis protein 2-like(LOC108467522) | coding protein | psRNATarget |