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BaseInfo

ncRNA ID novel_gar_miR1148
Species Gossypium arboreum
Class miRNA
Genome position Chr8:1300053-1300128 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715;SRR3180719;SRR3180720;SRR3180721;SRR1029586
Length 21
Mature sequence(if miRNA) 1 - UCAUGAUCUUUAGUGGCGUUU - 21
Stem-loop(if miRNA) --               CCA UC          G   U
  GCGCCACUAAAGGUU   A  UUUAGCGGCG UUU U
  |||||||||||||||   |  |||||||||| |||
  UGCGGUGAUUUCUAG   U  AAAUCGCCGC AAA A
UU               UAC GA          G   A
Stem-loop sequence GCGCCACUAAAGGUUCCAAUCUUUAGCGGCGGUUUUUAAAAAGCGCCGCUAAAAGUCAUGAUCUUUAGUGGCGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017768165.1
ncRNA:21   UUUGCGGUGAUUUCUAGUACU   1
  ||=||||=||||||||||||*
targets:1500   AAGCGCCGCUAAAGAUCAUGU   1520

3.0 PREDICTED: Gossypium arboreum diphthamide biosynthesis protein 2-like (LOC108467522), mRNA diphthamide biosynthesis protein 2-like(LOC108467522) coding protein psRNATarget