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BaseInfo

ncRNA ID novel_gar_miR1145
Species Gossypium arboreum
Class miRNA
Genome position Chr11:85859367-85859544 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715;SRR3180720
Length 24
Mature sequence(if miRNA) 155 - AUGGAUUGCCACGUGAAUGACGCA - 178
Stem-loop(if miRNA) --A              A    CG        A        A       U   ----UUU      UGU    ACUU       UAA      U
   UGGAUUGCCACGUG AUGA  CAUCAGUA UUAAUUAA UUUAAAA AUU       UUAUAA   UUAU    UUUUAAA   UUUUAA A
   |||||||||||||| ||||  |||||||| |||||||| ||||||| |||       ||||||   ||||    |||||||   ||||||
   ACUUAACGGUGCAC UACU  GUAGUUAU AAUUAGUU AAAUUUU UAG       AAUAUU   AAUA    AAAAUUU   AAAAUU U
UGC              C    AU        -        A       U   UUUUUUU      UUU    ----       -UA      U
Stem-loop sequence AUGGAUUGCCACGUGAAUGACGCAUCAGUAAUUAAUUAAAUUUAAAAUAUUUUUUUAUAAUGUUUAUACUUUUUUAAAUAAUUUUAAUAUUUUAAAAAUUUUAAAAAUAAUUUUUAUAAUUUUUUUGAUUUUUUAAAAUUGAUUAAUAUUGAUGUAUCAUCCACGUGGCAAUUCACGU