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BaseInfo

ncRNA ID	ath-miRf11055-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CAGCUCCCAUGGAAGCAGAA - NA
Stem-loop(if miRNA)	AG       ---     C       UUAGCUC UCUUCCUCC  CUCCCAU   GGAAG AGAACCA       U |||||||||  |||||||   ||||| |||||||       G AGGGGGGGG  GGGGGUG   UUUUU UUUUGGU       U          -G       UGU     U       UUUUUUA
Stem-loop sequence	UCUUCCUCCAGCUCCCAUGGAAGCAGAACCAUUAGCUCUGUAUUUUUUUGGUUUUUUUUUUUGUGUGGGGGGGGGGGGGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_112528.1	ncRNA:20   AAGACGAAGGUACCCUCGAC   1   |||||||||||||||||||| targets:5   UUCUGCUUCCAUGGGAGCUG   24 Target Full Sequence	0.0	Arabidopsis thaliana F-box family protein partial mRNA	F-box family protein(AT3G16555)	coding protein	psRNATarget
NM_001035760.2	ncRNA:20   AAGACGAAGGUACCCUCGAC   1   |||*|||||||||||||||* targets:56   UUCCGCUUCCAUGGGAGCUA   75 Target Full Sequence	2.0	Arabidopsis thaliana F-box and associated interaction domains-containing protein mRNA	F-box and associated interaction domains-containing protein(AT3G51171)	coding protein	psRNATarget
EF182876.1	ncRNA:20   AAGACGAAGGUACCCUCGAC   1   |||*|||||||||||||||* targets:56   UUCCGCUUCCAUGGGAGCUA   75 Target Full Sequence	2.0	Arabidopsis thaliana clone asmbl_10517 unknown mRNA sequence	NA	coding protein	psRNATarget
BT012356.1	ncRNA:20   AAGACGAAGGUACCCUCGAC   1   |||**||||||||||||||| targets:1049   UUCCACUUCCAUGGGAGCUG   1068 Target Full Sequence	2.0	Arabidopsis thaliana At5g64090 mRNA, complete cds	NA	coding protein	psRNATarget
AK226676.1	ncRNA:20   AAGACGAAGGUACCCUCGAC   1   |||**||||||||||||||| targets:1113   UUCCACUUCCAUGGGAGCUG   1132 Target Full Sequence	2.0	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL07-51-J01	NA	coding protein	psRNATarget
BX832527.1	ncRNA:20   AAGACGAAGGUACCCUCGAC   1   |||**||||||||||||||| targets:1091   UUCCACUUCCAUGGGAGCUG   1110 Target Full Sequence	2.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH78ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_125805.5	ncRNA:20   AAGACGAAGGUACCCUCGAC   1   |||**||||||||||||||| targets:1205   UUCCACUUCCAUGGGAGCUG   1224 Target Full Sequence	2.0	Arabidopsis thaliana hyccin mRNA	hyccin(AT5G64090)	coding protein	psRNATarget
BX816473.1	ncRNA:20   AAGACGAAGGUACCCUCGAC   1   ||=||*|||||||||||||* targets:1449   UUUUGAUUCCAUGGGAGCUU   1468 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH50ZD11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX815624.1	ncRNA:20   AAGACGAAGGUACCCUCGAC   1   ||=||*|||||||||||||* targets:1505   UUUUGAUUCCAUGGGAGCUU   1524 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZF08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX815718.1	ncRNA:20   AAGACGAAGGUACCCUCGAC   1   ||=||*|||||||||||||* targets:1543   UUUUGAUUCCAUGGGAGCUU   1562 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS87ZE09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY128294.1	ncRNA:20   AAGACGAAGGUACCCUCGAC   1   ||=||*|||||||||||||* targets:1494   UUUUGAUUCCAUGGGAGCUU   1513 Target Full Sequence	3.0	Arabidopsis thaliana At1g34430/F7P12_2 mRNA, complete cds	NA	coding protein	psRNATarget
NM_103166.4	ncRNA:20   AAGACGAAGGUACCCUCGAC   1   ||=||*|||||||||||||* targets:1575   UUUUGAUUCCAUGGGAGCUU   1594 Target Full Sequence	3.0	Arabidopsis thaliana 2-oxoacid dehydrogenases acyltransferase family protein (EMB3003), mRNA	2-oxoacid dehydrogenases acyltransferase family protein(EMB3003)	coding protein	psRNATarget