ncRNA ID | novel_gar_miR1140 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:63717961-63718014 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 19 |
Mature sequence(if miRNA) | 36 - CGAUUCUCGGCAACGGAUA - 54 |
Stem-loop(if miRNA) |
--    -U        C  AU   UGUU   CGAU  CUCGGCAA GG  ACC    C   ||||  |||||||| ||  |||   GCUG  GAGUUGUU CC  UGG    U UA    UC        -  AC   UAUU |
Stem-loop sequence | CGAUUCUCGGCAACGGAUACCUGUUCUUUAUGGUCACCUUGUUGAGCUGUCGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017753787.1 |
|
1.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108455194 (LOC108455194), mRNA | uncharacterized LOC108455194(LOC108455194) | coding protein | psRNATarget | |||||||||
XM_017753790.1 |
|
1.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108455200 (LOC108455200), mRNA | uncharacterized LOC108455200(LOC108455200) | coding protein | psRNATarget |