ncRNA ID | novel_gar_miR1137 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:74179868-74179980 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 21 |
Mature sequence(if miRNA) | 93 - UCGACUUUGCUGGAUUAUGAG - 113 |
Stem-loop(if miRNA) |
--    C                          AUC     AUCG    -----U     A   UCGA UUUGCUGGAUUAUGAGUCUAAUUUUU   UUUUC    UUGC      UGAUC A   |||| ||||||||||||||||||||||||||   |||||    ||||      ||||| A   AGCU AAACGACUUAAUACUUAGAUUAAAAA   AAAAG    AACG      GCUAG U AC    A                          ---     --GA    UUUGUU     U |
Stem-loop sequence | UCGACUUUGCUGGAUUAUGAGUCUAAUUUUUAUCUUUUCAUCGUUGCUUGAUCAAAUUGAUCGUUGUUUGCAAAGGAAAAAAAAAUUAGAUUCAUAAUUCAGCAAAAUCGACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017782758.1 |
|
3.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108479909 (LOC108479909), mRNA | uncharacterized LOC108479909(LOC108479909) | coding protein | psRNATarget |