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BaseInfo

ncRNA ID novel_gar_miR1137
Species Gossypium arboreum
Class miRNA
Genome position Chr8:74179868-74179980 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715
Length 21
Mature sequence(if miRNA) 93 - UCGACUUUGCUGGAUUAUGAG - 113
Stem-loop(if miRNA) --    C                          AUC     AUCG    -----U     A
  UCGA UUUGCUGGAUUAUGAGUCUAAUUUUU   UUUUC    UUGC      UGAUC A
  |||| ||||||||||||||||||||||||||   |||||    ||||      ||||| A
  AGCU AAACGACUUAAUACUUAGAUUAAAAA   AAAAG    AACG      GCUAG U
AC    A                          ---     --GA    UUUGUU     U
Stem-loop sequence UCGACUUUGCUGGAUUAUGAGUCUAAUUUUUAUCUUUUCAUCGUUGCUUGAUCAAAUUGAUCGUUGUUUGCAAAGGAAAAAAAAAUUAGAUUCAUAAUUCAGCAAAAUCGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017782758.1
ncRNA:21   GAGUAUUAGGUCGUUUCA-GCU   1
  ||||||||||||||||||-|||
targets:311   CUCAUAAUCCAGCAAAGUGCGA   332

3.0 PREDICTED: Gossypium arboreum uncharacterized LOC108479909 (LOC108479909), mRNA uncharacterized LOC108479909(LOC108479909) coding protein psRNATarget