ncRNA ID | novel_gar_miR1129 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:95110693-95110888 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715;SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 173 - AGACUAGUUUGCUCUUUGAUUUAA - 196 |
Stem-loop(if miRNA) |
--          A          ----CU      AG   A     -U                 AGUUCCUAUA  UUGACAUGAGCUAUAUGUGGCACAGC   AGAUCAAAGA CAAAUUGGUC      GUUAAA  UUU AUCCA  UUUUACUGUUAAAAAUU          GG                          A   |||||||||| ||||||||||      ||||||  ||| |||||  |||||||||||||||||          ||   UUUAGUUUCU GUUUGAUCAG      CAAUUU  AAA UAGGU  AAGAUGAUAAUUUUUGA          GC                          U AA          C          AAAAAU      AA   A     UU                 -----CUGUA  GACCGCCUUAUUUGUCUAUCAACAUG |
Stem-loop sequence | AGAUCAAAGAACAAAUUGGUCCUGUUAAAAGUUUAAUCCAUUUUUACUGUUAAAAAUUAGUUCCUAUAGGUUGACAUGAGCUAUAUGUGGCACAGCAUGUACAACUAUCUGUUUAUUCCGCCAGCGAUGUCAGUUUUUAAUAGUAGAAUUUGGAUAAAAAAUUUAACUAAAAAGACUAGUUUGCUCUUUGAUUUAA |