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BaseInfo

ncRNA ID novel_gar_miR1129
Species Gossypium arboreum
Class miRNA
Genome position Chr8:95110693-95110888 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715;SRR3180720
Length 24
Mature sequence(if miRNA) 173 - AGACUAGUUUGCUCUUUGAUUUAA - 196
Stem-loop(if miRNA) --          A          ----CU      AG   A     -U                 AGUUCCUAUA  UUGACAUGAGCUAUAUGUGGCACAGC
  AGAUCAAAGA CAAAUUGGUC      GUUAAA  UUU AUCCA  UUUUACUGUUAAAAAUU          GG                          A
  |||||||||| ||||||||||      ||||||  ||| |||||  |||||||||||||||||          ||
  UUUAGUUUCU GUUUGAUCAG      CAAUUU  AAA UAGGU  AAGAUGAUAAUUUUUGA          GC                          U
AA          C          AAAAAU      AA   A     UU                 -----CUGUA  GACCGCCUUAUUUGUCUAUCAACAUG
Stem-loop sequence AGAUCAAAGAACAAAUUGGUCCUGUUAAAAGUUUAAUCCAUUUUUACUGUUAAAAAUUAGUUCCUAUAGGUUGACAUGAGCUAUAUGUGGCACAGCAUGUACAACUAUCUGUUUAUUCCGCCAGCGAUGUCAGUUUUUAAUAGUAGAAUUUGGAUAAAAAAUUUAACUAAAAAGACUAGUUUGCUCUUUGAUUUAA