ncRNA ID | novel_gar_miR1127 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:81272228-81272311 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 21 |
Mature sequence(if miRNA) | 64 - UUGAAUCUUGAUGAUGCUGCA - 84 |
Stem-loop(if miRNA) |
--                  U           CUAAGAG  U   CGGCAUCGUCAAGAUUCA AGAAAAUUUUC       CC G   |||||||||||||||||| |||||||||||       || U   GUCGUAGUAGUUCUAAGU UCUUUUGAAAG       GG U AC                  -           UUCCGUA  U |
Stem-loop sequence | CGGCAUCGUCAAGAUUCAUAGAAAAUUUUCCUAAGAGCCUGUUUGGAUGCCUUGAAAGUUUUCUUGAAUCUUGAUGAUGCUGCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017773455.1 |
|
2.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108471910 (LOC108471910), mRNA | uncharacterized LOC108471910(LOC108471910) | coding protein | psRNATarget | |||||||||
XM_017781896.1 |
|
3.0 | PREDICTED: Gossypium arboreum cytochrome P450 714C2-like (LOC108479353), mRNA | cytochrome P450 714C2-like(LOC108479353) | coding protein | psRNATarget |