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BaseInfo

ncRNA ID	novel_gar_miR1123
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr7:3217753-3217805 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180715;SRR3180720
Length	24
Mature sequence(if miRNA)	30 - AUAAUGCUCUGUAACCCUGUUCUG - 53
Stem-loop(if miRNA)	--A         G      -UG   U G    UAAUGCUCU UAACCC   UUC G U    ||||||||| ||||||   ||| |    AUUGUGGGG AUUGGG   AAG C G CAC         -      CAA   - A
Stem-loop sequence	AUAAUGCUCUGUAACCCUGUUCUGGUGACGAAAACGGGUUAGGGGUGUUACAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017750397.1	ncRNA:24   GUCUUGUCCCAAUGUCUCGUAAUA   1   ==|||=||||||||=||||||||| targets:687   UGGAAUAGGGUUACGGAGCAUUAU   710 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum uncharacterized LOC108452575 (LOC108452575), transcript variant X4, mRNA	uncharacterized LOC108452575(LOC108452575)	coding protein	psRNATarget
XM_017750381.1	ncRNA:24   GUCUUGUCCCAAUGUCUCGUAAUA   1   ==|||=||||||||=||||||||| targets:869   UGGAAUAGGGUUACGGAGCAUUAU   892 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum uncharacterized LOC108452575 (LOC108452575), transcript variant X2, mRNA	uncharacterized LOC108452575(LOC108452575)	coding protein	psRNATarget
XM_017750389.1	ncRNA:24   GUCUUGUCCCAAUGUCUCGUAAUA   1   ==|||=||||||||=||||||||| targets:871   UGGAAUAGGGUUACGGAGCAUUAU   894 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum uncharacterized LOC108452575 (LOC108452575), transcript variant X3, mRNA	uncharacterized LOC108452575(LOC108452575)	coding protein	psRNATarget
XM_017750373.1	ncRNA:24   GUCUUGUCCCAAUGUCUCGUAAUA   1   ==|||=||||||||=||||||||| targets:885   UGGAAUAGGGUUACGGAGCAUUAU   908 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum uncharacterized LOC108452575 (LOC108452575), transcript variant X1, mRNA	uncharacterized LOC108452575(LOC108452575)	coding protein	psRNATarget