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BaseInfo

ncRNA ID ath-miRf11053-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - UACCAUCUCUUGAGGAACUUGG - NA
Stem-loop(if miRNA)   AG          -U     -A  ----U G     -----A   UGAUGAACAAGUAAGAGGUGAUCUGUUUUCUUUAGG
GA  UACCAUCUCU  GAGGA  CU     G CUACA      AGA                                    U
||  ||||||||||  |||||  ||     | |||||      |||                                    C
CU  GUGGUGGAGA  UUCCU  GG     C GAUGU      AUG                                    G
  AA          UU     CA  UUAGU G     CUGUAA   UACUCGUAUUCUAAGAGUCUACCUAUUUAACAAUUU
Stem-loop sequence GAAGUACCAUCUCUUGAGGAACUUGGCUACAAAGAUGAUGAACAAGUAAGAGGUGAUCUGUUUUCUUUAGGUCGUUUAACAAUUUAUCCAUCUGAGAAUCUUAUGCUCAUGUAAAUGUCUGUAGGCUGAUUGGACUCCUUUUAGAGGUGGUGAAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK119089.1
ncRNA:22   GGUUCAAGGAGUUCUCUACCAU   1
  =|=|||*==|||||||||||||
targets:529   UCGAGUAUUUCAAGAGAUGGUA   550

3.0 Arabidopsis thaliana mRNA, clone: RAFL21-43-P21 NA coding protein psRNATarget