ncRNA ID | ath-miRf11053-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - UACCAUCUCUUGAGGAACUUGG - NA |
Stem-loop(if miRNA) |
  AG          -U     -A  ----U G     -----A   UGAUGAACAAGUAAGAGGUGAUCUGUUUUCUUUAGG GA  UACCAUCUCU  GAGGA  CU     G CUACA      AGA                                    U ||  ||||||||||  |||||  ||     | |||||      |||                                    C CU  GUGGUGGAGA  UUCCU  GG     C GAUGU      AUG                                    G   AA          UU     CA  UUAGU G     CUGUAA   UACUCGUAUUCUAAGAGUCUACCUAUUUAACAAUUU |
Stem-loop sequence | GAAGUACCAUCUCUUGAGGAACUUGGCUACAAAGAUGAUGAACAAGUAAGAGGUGAUCUGUUUUCUUUAGGUCGUUUAACAAUUUAUCCAUCUGAGAAUCUUAUGCUCAUGUAAAUGUCUGUAGGCUGAUUGGACUCCUUUUAGAGGUGGUGAAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK119089.1 |
|
3.0 | Arabidopsis thaliana mRNA, clone: RAFL21-43-P21 | NA | coding protein | psRNATarget |