| ncRNA ID | novel_gar_miR1121 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr7:27769114-27769279 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180715;SRR3180720 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - UCGAUAUUGUUCUCUUUGGGC - 21 |
| Stem-loop(if miRNA) |
-- A CAUC AC G CACUU - UC CCUC G -AGAG UCC UCG UAUUGUUCUCUUUGGG CAUUG CUCUCAAG UUUUGU GAAG G UCA CCCAA GA AC U ||| |||||||||||||||| ||||| |||||||| |||||| |||| | ||| ||||| || || GGU AUAACAAGAGAAACCC GUAAC GGGAGUUC AAAACA CUUC C AGU GGGUU UU UG A AU C ACAA CA - -AUUU A GA --UU A GAAAA UAU |
| Stem-loop sequence | UCGAUAUUGUUCUCUUUGGGCAUCCAUUGACCUCUCAAGGUUUUGUCACUUGAAGGUCUCACCUCCCCAAGGAAGAGACUCCUAUAUGUAAAAGUUAUUGGGUUUGAAGCACUUCUUUAACAAAACUUGAGGGACCAAUGAACACCCAAAGAGAACAAUACUGGUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017752374.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108454065 (LOC108454065), mRNA | uncharacterized LOC108454065(LOC108454065) | coding protein | psRNATarget | |||||||||
| XM_017772806.1 |
|
3.0 | PREDICTED: Gossypium arboreum L10-interacting MYB domain-containing protein-like (LOC108471198), mRNA | L10-interacting MYB domain-containing protein-like(LOC108471198) | coding protein | psRNATarget |