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BaseInfo

ncRNA ID novel_gar_miR1119
Species Gossypium arboreum
Class miRNA
Genome position Chr7:38506273-38506424 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715
Length 21
Mature sequence(if miRNA) 1 - UGACCAACUUGUAACUUUUCA - 21
Stem-loop(if miRNA) --           A  A                    ----UA            -------     -------------     UAG
  AAAAGUUACAA UU GUCAUUUAAUUAUUUAAUUU      UUUUUUUGUCAC       CCAAU             UAUCU   A
  ||||||||||| || ||||||||||||||||||||      ||||||||||||       |||||             |||||
  UUUUCAAUGUU AA CAGUAAGUUAAUAAGUUAAA      AAAAAAACAGUG       GGUUA             GUGGA   U
AC           C  C                    CAAAAA            AUCACCU     CAUUUUUACUUUU     UUU
Stem-loop sequence AAAAGUUACAAAUUAGUCAUUUAAUUAUUUAAUUUUAUUUUUUUGUCACCCAAUUAUCUUAGAUUUUAGGUGUUUUCAUUUUUACAUUGGUCCACUAGUGACAAAAAAAAAAAACAAAUUGAAUAAUUGAAUGACCAACUUGUAACUUUUCA